Strain | Relevant characteristic(s) | Source or reference |
---|---|---|
E. coli DH5α | F-,φ80dlacZ ΔM15,Δ(lacZYA -argF)U169, deoR, recA1, endA1,hsdR17 (rK-, mK +), phoA, supE44, λ-, thi-1, gyrA96, relA1 | TransGen, Beijing |
E. coli BW25113-T7 | F-, DE(araD-araB)567, lacZ4787(del)::rrnB-3, LAM-, rph-1, DE(rhaD-rhaB)568, hsdR514, int:: (lacI:: PlacUV5:: T7 gene) ΔybhC | Laboratory stock |
E. coli A2 | E. coli BW25113-T7 ΔaceB, ΔdppA, ΔhemF, ΔgalR int ppc with J23119, ΔpoxB int glk with J23119) | This study |
E. coli 108 | E. coli A2 ΔPhemB, Int::J23108 | This study |
E. coli 111 | E. coli A2 ΔPhemB, Int::J23111 | This study |
E. coli 116 | E. coli A2 ΔPhemB, Int::J23116 | This study |
E. coli BWT7-RSA | E. coli BW25113-T7 harboring pET28b-LAA and pACYCD-hemA-RS | This study |
E. coli A2-RSA | E. coli A2 harboring pET28b-LAA and pACYCD-hemA-RS | This study |
E. coli BWT7-LAA | E. coli BW25113-T7 harboring pET28b-LAA | This study |
E. coli BWT7-LAA(C) | E. coli BW25113-T7 harboring pET28b-LA-eamA(C) | This study |
E. coli BWT8-LAA(C1) | E. coli BW25113-T7 harboring pET28b-LA-eamA(C1) | This study |
E. coli A2-RSA-C1 | E. coli A2 harboring pET28b-LA-eamA(C1) and pACYCD-hemA-RS | This study |
E. coli A2-ASK | E. coli A2 harboring pET28b-LA-eamA(C1) and pACYCD-ASK | This study |
E. coli 108-ASK | E. coli 108 harboring pET28b-LA-eamA(C1) and pACYCD-ASK | This study |
E. coli 111-ASK | E. coli 111 harboring pET28b-LA-eamA(C1) and pACYCD-ASK | This study |
E. coli 116-ASK | E. coli 116 harboring pET28b-LA-eamA(C1) and pACYCD-ASK | This study |
Plasmids | Relevant characteristic(s) | Source or reference |
pUC57 | Cloning vector, AmpR, ColE1/pMB1/pBR322/pUC ori | Laboratory stock |
pACYCD | Cloning vector, CmR, p15a ori | Laboratory stock |
pET-28b | Cloning vector, f1 ori; KanR | Laboratory stock |
pUC57-sYFP | pUC57 with sYFP gene and J23107 promoter | Laboratory stock |
pUC-sYFP-pHemL | pUC57 with sYFP gene and PhemL (promoter of hemL gene) | This study |
pET28b-LAA | f1 ori; KanR; hemA; hemL; eamA; LacI gene and T7-LacI promoter | Laboratory stock |
pSC-LA-eamA | temperature sensitive oriR101; KanR; hemA; hemL; eamA; LacI gene and T7-LacI promoter | This study |
pET28b-LA-eamA(C) | f1 ori; KanR; hemA; hemL; eamA(C); LacI gene and T7-LacI promoter | This study |
pET28b-LA-eamA(C1) | f1 ori; KanR; hemA; hemL; eamA(C1); LacI gene and T7-LacI promoter | This study |
pCas | plasmid for CRISPR (temperature sensitive oriR101; KanR; the λ-Red operon under the control of arabinose-inducible promoter; S. pyogenes-derived cas9; sgRNA guided to ori-p15a under the control of lac operator) | Laboratory stock |
pTarget-gene | plasmid for CRISPR (p15a ori; CmR; sgRNA guided to targeted gene, such as hemF, aceB, poxB gene and so on) | This study |
pACYCD-gene | pACYCD containing targeted gene (such as hemF, aceB, poxB gene and so on) | This study |
pACYCD-Donor DNA | pACYCD containing Donor DNA for targeted gene (such as hemF, aceB, poxB gene and so on) | This study |
pACYCD-RS-hemA | pACYCD containing hemA from R. sphaeroides (modified) and T7-LacI promoter | This study |
pACYCD-ASK | pACYCD containing hemA from R. sphaeroides (modified) and T7-LacI promoter; sodB, katE and J23107 promoter | This study |